Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga6Q91XY2 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga6Q91XY2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga6Q91XY2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga6Q91XY2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhga6Q91XY2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga6Q91XY2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdhga6Q91XY2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhga6Q91XY2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhga6Q91XY2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhga6Q91XY2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhga6Q91XY2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhga6Q91XY2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.9□□□□□ -0.51
Pcdhga6Q91XY2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.9□□□□□ -0.51
Pcdhga6Q91XY2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhga6Q91XY2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Gm4726-201ENSMUST00000135604 736 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Gm6019-201ENSMUST00000148369 736 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Gm23218-201ENSMUST00000158124 276 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Gm27910-201ENSMUST00000185004 107 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Gm5621-201ENSMUST00000187303 640 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Gm4157-201ENSMUST00000211647 679 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhga6Q91XY2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Gm22144-201ENSMUST00000157402 102 ntBASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Gm42937-201ENSMUST00000197360 752 ntBASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhga6Q91XY2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhga6Q91XY2 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms