Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Gm8531-201ENSMUST00000188319 893 ntBASIC13.55□□□□□ -0.24
Trex1Q91XB0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.55□□□□□ -0.24
Trex1Q91XB0 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.55□□□□□ -0.24
Trex1Q91XB0 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.55□□□□□ -0.24
Trex1Q91XB0 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.55□□□□□ -0.24
Trex1Q91XB0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.55□□□□□ -0.24
Trex1Q91XB0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trex1Q91XB0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Gm11244-201ENSMUST00000121243 237 ntBASIC13.54□□□□□ -0.24
Trex1Q91XB0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Gm26047-201ENSMUST00000157308 113 ntBASIC13.54□□□□□ -0.24
Trex1Q91XB0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Gm26047-202ENSMUST00000198840 115 ntBASIC13.54□□□□□ -0.24
Trex1Q91XB0 Gm7504-201ENSMUST00000201449 424 ntBASIC13.54□□□□□ -0.24
Trex1Q91XB0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.54□□□□□ -0.24
Trex1Q91XB0 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.54□□□□□ -0.24
Trex1Q91XB0 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.54□□□□□ -0.24
Trex1Q91XB0 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.54□□□□□ -0.24
Trex1Q91XB0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.54□□□□□ -0.24
Trex1Q91XB0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trex1Q91XB0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.53□□□□□ -0.24
Trex1Q91XB0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm15615-201ENSMUST00000118876 198 ntBASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm42599-201ENSMUST00000201308 469 ntBASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm3793-201ENSMUST00000204973 672 ntBASIC13.53□□□□□ -0.24
Trex1Q91XB0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms