Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.77□□□□□ -0.53
Vsx1Q91V10 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.77□□□□□ -0.53
Vsx1Q91V10 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vsx1Q91V10 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.77□□□□□ -0.53
Vsx1Q91V10 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Vsx1Q91V10 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.76□□□□□ -0.53
Vsx1Q91V10 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.76□□□□□ -0.53
Vsx1Q91V10 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Gm14193-201ENSMUST00000105067 153 ntBASIC11.76□□□□□ -0.53
Vsx1Q91V10 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.76□□□□□ -0.53
Vsx1Q91V10 Gm18367-201ENSMUST00000176139 600 ntBASIC11.76□□□□□ -0.53
Vsx1Q91V10 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.76□□□□□ -0.53
Vsx1Q91V10 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.76□□□□□ -0.53
Vsx1Q91V10 Arhgef33-207ENSMUST00000224966 490 ntBASIC11.76□□□□□ -0.53
Vsx1Q91V10 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.76□□□□□ -0.53
Vsx1Q91V10 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.76□□□□□ -0.53
Vsx1Q91V10 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Vsx1Q91V10 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gm15036-201ENSMUST00000118880 400 ntBASIC11.75□□□□□ -0.53
Vsx1Q91V10 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gm3551-201ENSMUST00000190750 664 ntBASIC11.75□□□□□ -0.53
Vsx1Q91V10 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gm18204-201ENSMUST00000209835 793 ntBASIC11.75□□□□□ -0.53
Vsx1Q91V10 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gm5705-201ENSMUST00000066241 711 ntBASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms