Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Gm14441-201ENSMUST00000121960 540 ntBASIC12.74□□□□□ -0.37
TraipQ8VIG6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Gm26047-201ENSMUST00000157308 113 ntBASIC12.74□□□□□ -0.37
TraipQ8VIG6 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.74□□□□□ -0.37
TraipQ8VIG6 Gm26047-202ENSMUST00000198840 115 ntBASIC12.74□□□□□ -0.37
TraipQ8VIG6 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Gm8285-201ENSMUST00000208293 759 ntBASIC12.74□□□□□ -0.37
TraipQ8VIG6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.74□□□□□ -0.37
TraipQ8VIG6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.74□□□□□ -0.37
TraipQ8VIG6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.74□□□□□ -0.37
TraipQ8VIG6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TraipQ8VIG6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.73□□□□□ -0.37
TraipQ8VIG6 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Gm7961-201ENSMUST00000201338 1436 ntBASIC12.73□□□□□ -0.37
TraipQ8VIG6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Gm24844-201ENSMUST00000158679 127 ntBASIC12.73□□□□□ -0.37
TraipQ8VIG6 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Gm19459-201ENSMUST00000176240 835 ntBASIC12.73□□□□□ -0.37
TraipQ8VIG6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Gm37319-201ENSMUST00000193500 636 ntBASIC12.73□□□□□ -0.37
TraipQ8VIG6 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.73□□□□□ -0.37
TraipQ8VIG6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TraipQ8VIG6 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.73□□□□□ -0.37
TraipQ8VIG6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms