Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm11663-201ENSMUST00000117888 290 ntBASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Gm15131-201ENSMUST00000119124 595 ntBASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Mir6546-201ENSMUST00000184460 62 ntBASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Gm18893-201ENSMUST00000198416 943 ntBASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Matn2-203ENSMUST00000226766 3252 ntBASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdhr1Q8VHP6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Cog3-203ENSMUST00000227473 4197 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Gm13809-201ENSMUST00000117921 597 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Gm10774-201ENSMUST00000188689 204 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Mir7686-201ENSMUST00000200604 57 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Gm18165-201ENSMUST00000217426 928 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdhr1Q8VHP6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdhr1Q8VHP6 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms