Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Gm8531-201ENSMUST00000188319 893 ntBASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Gm44158-201ENSMUST00000203881 505 ntBASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Gm45594-201ENSMUST00000211717 241 ntBASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp7Q8R1T1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Gm15172-201ENSMUST00000118945 1046 ntBASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Gm14441-201ENSMUST00000121960 540 ntBASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Gm1840-201ENSMUST00000051687 1432 ntBASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp7Q8R1T1 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Gm15615-201ENSMUST00000118876 198 ntBASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Gm11244-201ENSMUST00000121243 237 ntBASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Gm19091-201ENSMUST00000208120 978 ntBASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 CT009546.1-201ENSMUST00000222573 1120 ntBASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 AC174797.2-202ENSMUST00000225729 568 ntBASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Gm23680-201ENSMUST00000083162 164 ntBASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Gm37859-201ENSMUST00000195529 2173 ntBASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp7Q8R1T1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms