Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ebf4Q8K4J2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ebf4Q8K4J2 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm12203-201ENSMUST00000118235 598 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm11803-201ENSMUST00000119966 444 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm12209-201ENSMUST00000120089 596 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm14441-201ENSMUST00000121960 540 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm5706-201ENSMUST00000181525 993 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm44855-201ENSMUST00000205725 362 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ebf4Q8K4J2 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Gm5745-201ENSMUST00000183748 313 ntBASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Gm42937-201ENSMUST00000197360 752 ntBASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.76□□□□□ -0.69
Ebf4Q8K4J2 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms