Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.18□□□□□ -0.62
Clrn1Q8K445 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.18□□□□□ -0.62
Clrn1Q8K445 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.18□□□□□ -0.62
Clrn1Q8K445 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Clrn1Q8K445 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clrn1Q8K445 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.17□□□□□ -0.62
Clrn1Q8K445 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Rubie-203ENSMUST00000227803 2430 ntBASIC11.17□□□□□ -0.62
Clrn1Q8K445 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 AY036118-201ENSMUST00000200021 923 ntBASIC11.17□□□□□ -0.62
Clrn1Q8K445 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Gm19287-201ENSMUST00000203190 358 ntBASIC11.17□□□□□ -0.62
Clrn1Q8K445 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.17□□□□□ -0.62
Clrn1Q8K445 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Gm8385-201ENSMUST00000058999 643 ntBASIC11.17□□□□□ -0.62
Clrn1Q8K445 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clrn1Q8K445 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clrn1Q8K445 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms