Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cchcr1Q8K2I2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Gm4607-201ENSMUST00000206649 577 ntBASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Gm8420-201ENSMUST00000097103 598 ntBASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cchcr1Q8K2I2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Gm9034-201ENSMUST00000182071 1005 ntBASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Gm32999-201ENSMUST00000192693 562 ntBASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Rprl1-202ENSMUST00000198476 238 ntBASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Gzmn-202ENSMUST00000225535 989 ntBASIC14□□□□□ -0.17
Cchcr1Q8K2I2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Gm5455-201ENSMUST00000058710 715 ntBASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cchcr1Q8K2I2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Gm38314-201ENSMUST00000195709 625 ntBASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Gm43002-201ENSMUST00000200310 155 ntBASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cchcr1Q8K2I2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms