Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.16□□□□□ -0.46
CopaQ8CIE6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
CopaQ8CIE6 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.15□□□□□ -0.46
CopaQ8CIE6 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.15□□□□□ -0.46
CopaQ8CIE6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Gm27552-201ENSMUST00000183351 62 ntBASIC12.15□□□□□ -0.46
CopaQ8CIE6 Gm27844-201ENSMUST00000183613 62 ntBASIC12.15□□□□□ -0.46
CopaQ8CIE6 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Gm9230-201ENSMUST00000188228 532 ntBASIC12.15□□□□□ -0.46
CopaQ8CIE6 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Gm19994-201ENSMUST00000217086 586 ntBASIC12.15□□□□□ -0.46
CopaQ8CIE6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopaQ8CIE6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.15□□□□□ -0.46
CopaQ8CIE6 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CopaQ8CIE6 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
CopaQ8CIE6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CopaQ8CIE6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CopaQ8CIE6 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.15□□□□□ -0.47
CopaQ8CIE6 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.14□□□□□ -0.47
CopaQ8CIE6 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.14□□□□□ -0.47
CopaQ8CIE6 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.14□□□□□ -0.47
CopaQ8CIE6 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.14□□□□□ -0.47
CopaQ8CIE6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CopaQ8CIE6 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.14□□□□□ -0.47
CopaQ8CIE6 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Gm9996-201ENSMUST00000070359 913 ntBASIC12.14□□□□□ -0.47
CopaQ8CIE6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopaQ8CIE6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms