Protein–RNA interactions for Protein: Q8CFD4

Snx8, Sorting nexin-8, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx8Q8CFD4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snx8Q8CFD4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snx8Q8CFD4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snx8Q8CFD4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snx8Q8CFD4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Snx8Q8CFD4 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snx8Q8CFD4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snx8Q8CFD4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snx8Q8CFD4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snx8Q8CFD4 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snx8Q8CFD4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snx8Q8CFD4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 BC043934-202ENSMUST00000185694 2356 ntBASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Gm11930-201ENSMUST00000117788 190 ntBASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Gm3961-201ENSMUST00000204425 994 ntBASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.82□□□□□ -0.52
Snx8Q8CFD4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snx8Q8CFD4 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.81□□□□□ -0.52
Snx8Q8CFD4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Gm24255-201ENSMUST00000104481 128 ntBASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Gm27046-201ENSMUST00000182160 463 ntBASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Gm19994-201ENSMUST00000217086 586 ntBASIC11.81□□□□□ -0.52
Snx8Q8CFD4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snx8Q8CFD4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms