Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Gm12164-201ENSMUST00000121695 551 ntBASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28aQ8CEI3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc28aQ8CEI3 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28aQ8CEI3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc28aQ8CEI3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28aQ8CEI3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc28aQ8CEI3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28aQ8CEI3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.46□□□□□ -0.42
Ccdc28aQ8CEI3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28aQ8CEI3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28aQ8CEI3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc28aQ8CEI3 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms