Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gm13039-201ENSMUST00000118638 794 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gm5909-201ENSMUST00000119768 1281 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gm26272-201ENSMUST00000179241 132 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Mir7035-201ENSMUST00000184713 82 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gm43275-201ENSMUST00000202053 1020 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gm45094-201ENSMUST00000207013 617 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 AC162932.1-201ENSMUST00000219209 872 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Mir326-201ENSMUST00000083637 95 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gm5171-201ENSMUST00000214944 1415 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gm14165-201ENSMUST00000121456 952 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gm4982-201ENSMUST00000160440 1098 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Gm2448-201ENSMUST00000207080 559 ntBASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col16a1Q8BLX7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col16a1Q8BLX7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col16a1Q8BLX7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col16a1Q8BLX7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.27■□□□□ 0.04
Col16a1Q8BLX7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Col16a1Q8BLX7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col16a1Q8BLX7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Gm14005-210ENSMUST00000225087 1413 ntBASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Gm5308-201ENSMUST00000196752 1354 ntBASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Gm27956-201ENSMUST00000175604 260 ntBASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Gm37284-201ENSMUST00000193607 539 ntBASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Gm43969-201ENSMUST00000204833 535 ntBASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 AC159002.1-201ENSMUST00000226714 924 ntBASIC15.27■□□□□ 0.03
Col16a1Q8BLX7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms