Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cdhr3Q8BL00 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Gm11531-201ENSMUST00000117614 555 ntBASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Mospd4-201ENSMUST00000180618 576 ntBASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Gm43118-201ENSMUST00000199149 775 ntBASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdhr3Q8BL00 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gm23931-201ENSMUST00000103842 109 ntBASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gm25214-201ENSMUST00000104573 129 ntBASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gm6114-201ENSMUST00000182472 968 ntBASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gm5370-201ENSMUST00000187187 574 ntBASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gm43133-201ENSMUST00000197472 463 ntBASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdhr3Q8BL00 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms