Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Gm14247-201ENSMUST00000120950 237 ntBASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Gm14441-201ENSMUST00000121960 540 ntBASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Gm45925-201ENSMUST00000218882 744 ntBASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc5a7Q8BGY9 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Gm24934-201ENSMUST00000103764 111 ntBASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Gm13342-201ENSMUST00000121055 207 ntBASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Gm18711-201ENSMUST00000199341 750 ntBASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Gm20949-201ENSMUST00000206478 952 ntBASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Gm5867-201ENSMUST00000063197 592 ntBASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc5a7Q8BGY9 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Gm13736-201ENSMUST00000119272 253 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms