Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Gm4984-201ENSMUST00000115987 360 ntBASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Gm13570-201ENSMUST00000140763 309 ntBASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Gm42937-201ENSMUST00000197360 752 ntBASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim6Q8BGE7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Gm12058-201ENSMUST00000118614 437 ntBASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Gm24548-201ENSMUST00000158650 108 ntBASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 172.5 ms