Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Pck2-205ENSMUST00000226352 2784 ntBASIC13.12□□□□□ -0.31
Usp6nlQ80XC3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Usp6nlQ80XC3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Usp6nlQ80XC3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Usp6nlQ80XC3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Usp6nlQ80XC3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Usp6nlQ80XC3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Usp6nlQ80XC3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Usp6nlQ80XC3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.12□□□□□ -0.31
Usp6nlQ80XC3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Usp6nlQ80XC3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm23218-201ENSMUST00000158124 276 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm8459-201ENSMUST00000162504 760 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm9136-201ENSMUST00000193368 454 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm5100-201ENSMUST00000195631 589 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm45594-201ENSMUST00000211717 241 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm7940-201ENSMUST00000218195 769 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm5451-201ENSMUST00000080545 579 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.11□□□□□ -0.31
Usp6nlQ80XC3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Gm23272-201ENSMUST00000104053 129 ntBASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Gm9192-201ENSMUST00000183221 985 ntBASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms