Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Gm11246-201ENSMUST00000120880 345 ntBASIC11.36□□□□□ -0.59
Vrk1Q80X41 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Gm43058-201ENSMUST00000197645 625 ntBASIC11.36□□□□□ -0.59
Vrk1Q80X41 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Gm2517-201ENSMUST00000215651 348 ntBASIC11.36□□□□□ -0.59
Vrk1Q80X41 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.36□□□□□ -0.59
Vrk1Q80X41 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Snora73b-201ENSMUST00000083419 205 ntBASIC11.36□□□□□ -0.59
Vrk1Q80X41 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.36□□□□□ -0.59
Vrk1Q80X41 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.35□□□□□ -0.59
Vrk1Q80X41 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm13916-201ENSMUST00000117368 628 ntBASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm15352-201ENSMUST00000118696 270 ntBASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm15207-201ENSMUST00000119259 442 ntBASIC11.35□□□□□ -0.59
Vrk1Q80X41 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm9358-201ENSMUST00000183067 927 ntBASIC11.35□□□□□ -0.59
Vrk1Q80X41 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.35□□□□□ -0.59
Vrk1Q80X41 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.35□□□□□ -0.59
Vrk1Q80X41 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vrk1Q80X41 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms