Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.08□□□□□ -0.64
Pif1Q80SX8 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Gm8199-201ENSMUST00000121323 823 ntBASIC11.08□□□□□ -0.64
Pif1Q80SX8 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.08□□□□□ -0.64
Pif1Q80SX8 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Gm27530-201ENSMUST00000184096 98 ntBASIC11.08□□□□□ -0.64
Pif1Q80SX8 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Gm19891-201ENSMUST00000189771 303 ntBASIC11.08□□□□□ -0.64
Pif1Q80SX8 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Gm18711-201ENSMUST00000199341 750 ntBASIC11.08□□□□□ -0.64
Pif1Q80SX8 Gm9132-201ENSMUST00000210182 832 ntBASIC11.08□□□□□ -0.64
Pif1Q80SX8 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.08□□□□□ -0.64
Pif1Q80SX8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pif1Q80SX8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.07□□□□□ -0.64
Pif1Q80SX8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Gm23912-201ENSMUST00000104687 87 ntBASIC11.07□□□□□ -0.64
Pif1Q80SX8 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Gm11628-201ENSMUST00000117568 171 ntBASIC11.07□□□□□ -0.64
Pif1Q80SX8 Gm15573-201ENSMUST00000119487 540 ntBASIC11.07□□□□□ -0.64
Pif1Q80SX8 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.07□□□□□ -0.64
Pif1Q80SX8 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Gm45550-201ENSMUST00000209380 946 ntBASIC11.07□□□□□ -0.64
Pif1Q80SX8 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.07□□□□□ -0.64
Pif1Q80SX8 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms