Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Gm14832-201ENSMUST00000121289 322 ntBASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Gm7722-201ENSMUST00000120646 741 ntBASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Gm11960-201ENSMUST00000122068 925 ntBASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Gm9192-201ENSMUST00000183221 985 ntBASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Gm42627-201ENSMUST00000197347 224 ntBASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.67□□□□□ -0.54
Scaf4Q6PFF0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms