Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Gm15547-201ENSMUST00000122152 333 ntBASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Gm37489-201ENSMUST00000191883 159 ntBASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rad54bQ6PFE3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Gm11222-201ENSMUST00000119005 738 ntBASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Gm37424-201ENSMUST00000191727 561 ntBASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Olfr284-202ENSMUST00000206647 966 ntBASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Gm4607-201ENSMUST00000206649 577 ntBASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Gm30285-201ENSMUST00000214614 422 ntBASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Gm807-202ENSMUST00000224929 408 ntBASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 BC043934-202ENSMUST00000185694 2356 ntBASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rad54bQ6PFE3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rad54bQ6PFE3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rad54bQ6PFE3 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Rad54bQ6PFE3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rad54bQ6PFE3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rad54bQ6PFE3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rad54bQ6PFE3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms