Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm37284-201ENSMUST00000193607 539 ntBASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Gm25053-202ENSMUST00000199731 132 ntBASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Gm44008-201ENSMUST00000204345 412 ntBASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup98Q6PFD9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm29067-201ENSMUST00000190821 470 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm18463-201ENSMUST00000207258 474 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm18460-201ENSMUST00000208088 464 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm19091-201ENSMUST00000208120 978 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Mt1-202ENSMUST00000211807 1085 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm15329-201ENSMUST00000121408 155 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm9353-201ENSMUST00000200472 604 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup98Q6PFD9 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.74□□□□□ -0.21
Nup98Q6PFD9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Gm12389-201ENSMUST00000117696 418 ntBASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Gm16219-201ENSMUST00000120096 274 ntBASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.73□□□□□ -0.21
Nup98Q6PFD9 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.73□□□□□ -0.21
Nup98Q6PFD9 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup98Q6PFD9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nup98Q6PFD9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms