Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Gm7985-201ENSMUST00000183329 981 ntBASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Gm43852-201ENSMUST00000202098 917 ntBASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Gm3726-201ENSMUST00000203110 785 ntBASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Gm16380-201ENSMUST00000077997 478 ntBASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc85bQ6PDY0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm22846-201ENSMUST00000157706 270 ntBASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm22119-201ENSMUST00000175594 99 ntBASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm26134-201ENSMUST00000178484 110 ntBASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm18801-201ENSMUST00000186616 536 ntBASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm42433-201ENSMUST00000196806 940 ntBASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm43969-201ENSMUST00000204833 535 ntBASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc85bQ6PDY0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc85bQ6PDY0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.4□□□□□ -0.43
Ccdc85bQ6PDY0 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.4□□□□□ -0.43
Ccdc85bQ6PDY0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc85bQ6PDY0 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc85bQ6PDY0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms