Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC13.71□□□□□ -0.21
Scn9aQ62205 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC13.71□□□□□ -0.21
Scn9aQ62205 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
Scn9aQ62205 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.71□□□□□ -0.21
Scn9aQ62205 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.71□□□□□ -0.21
Scn9aQ62205 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Scn9aQ62205 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Scn9aQ62205 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.71□□□□□ -0.22
Scn9aQ62205 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn9aQ62205 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn9aQ62205 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scn9aQ62205 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Scn9aQ62205 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn9aQ62205 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scn9aQ62205 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Scn9aQ62205 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Scn9aQ62205 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn9aQ62205 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn9aQ62205 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.22
Scn9aQ62205 Gm37452-201ENSMUST00000194416 1160 ntBASIC13.71□□□□□ -0.22
Scn9aQ62205 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scn9aQ62205 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.22
Scn9aQ62205 Gm7904-201ENSMUST00000217049 465 ntBASIC13.71□□□□□ -0.22
Scn9aQ62205 AC169511.1-201ENSMUST00000227639 995 ntBASIC13.71□□□□□ -0.22
Scn9aQ62205 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Scn9aQ62205 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn9aQ62205 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Scn9aQ62205 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.7□□□□□ -0.22
Scn9aQ62205 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Scn9aQ62205 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.7□□□□□ -0.22
Scn9aQ62205 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.7□□□□□ -0.22
Scn9aQ62205 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scn9aQ62205 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Scn9aQ62205 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.7□□□□□ -0.22
Scn9aQ62205 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Scn9aQ62205 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Gm24279-201ENSMUST00000104236 131 ntBASIC13.7□□□□□ -0.22
Scn9aQ62205 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC13.7□□□□□ -0.22
Scn9aQ62205 Gm12418-201ENSMUST00000118116 942 ntBASIC13.7□□□□□ -0.22
Scn9aQ62205 Gm24992-201ENSMUST00000157412 130 ntBASIC13.7□□□□□ -0.22
Scn9aQ62205 Gm7627-201ENSMUST00000183205 999 ntBASIC13.7□□□□□ -0.22
Scn9aQ62205 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.7□□□□□ -0.22
Scn9aQ62205 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.7□□□□□ -0.22
Scn9aQ62205 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.7□□□□□ -0.22
Scn9aQ62205 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn9aQ62205 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scn9aQ62205 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scn9aQ62205 Gm14165-201ENSMUST00000121456 952 ntBASIC13.69□□□□□ -0.22
Scn9aQ62205 Gm3329-201ENSMUST00000159873 556 ntBASIC13.69□□□□□ -0.22
Scn9aQ62205 Gm27390-201ENSMUST00000184516 176 ntBASIC13.69□□□□□ -0.22
Scn9aQ62205 Gm8384-201ENSMUST00000190905 704 ntBASIC13.69□□□□□ -0.22
Scn9aQ62205 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC13.69□□□□□ -0.22
Scn9aQ62205 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.69□□□□□ -0.22
Scn9aQ62205 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Scn9aQ62205 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Scn9aQ62205 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms