Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm7561-201ENSMUST00000211203 886 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox17Q61473 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sox17Q61473 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox17Q61473 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox17Q61473 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Sox17Q61473 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sox17Q61473 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.08□□□□□ -0.64
Sox17Q61473 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Sox17Q61473 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Sox17Q61473 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.08□□□□□ -0.64
Sox17Q61473 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.08□□□□□ -0.64
Sox17Q61473 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.08□□□□□ -0.64
Sox17Q61473 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox17Q61473 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox17Q61473 Gm27847-201ENSMUST00000183711 107 ntBASIC11.08□□□□□ -0.64
Sox17Q61473 Gm27375-201ENSMUST00000183799 107 ntBASIC11.08□□□□□ -0.64
Sox17Q61473 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.08□□□□□ -0.64
Sox17Q61473 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.08□□□□□ -0.64
Sox17Q61473 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.08□□□□□ -0.64
Sox17Q61473 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.08□□□□□ -0.64
Sox17Q61473 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Sox17Q61473 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.08□□□□□ -0.64
Sox17Q61473 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sox17Q61473 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.08□□□□□ -0.64
Sox17Q61473 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox17Q61473 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox17Q61473 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox17Q61473 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.07□□□□□ -0.64
Sox17Q61473 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Sox17Q61473 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox17Q61473 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sox17Q61473 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 Gm13875-201ENSMUST00000120162 282 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 Gm16177-201ENSMUST00000120728 718 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 Gm1335-201ENSMUST00000121653 386 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 Gm14441-201ENSMUST00000121960 540 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox17Q61473 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.07□□□□□ -0.64
Sox17Q61473 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms