Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Six4Q61321 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Gm38314-201ENSMUST00000195709 625 ntBASIC11.95□□□□□ -0.5
Six4Q61321 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.95□□□□□ -0.5
Six4Q61321 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Gm2553-201ENSMUST00000215986 605 ntBASIC11.95□□□□□ -0.5
Six4Q61321 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Six4Q61321 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Gm21811-201ENSMUST00000096485 930 ntBASIC11.95□□□□□ -0.5
Six4Q61321 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Six4Q61321 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Six4Q61321 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Six4Q61321 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.95□□□□□ -0.5
Six4Q61321 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Six4Q61321 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.94□□□□□ -0.5
Six4Q61321 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Six4Q61321 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Gm11663-201ENSMUST00000117888 290 ntBASIC11.94□□□□□ -0.5
Six4Q61321 Gm14724-201ENSMUST00000118400 537 ntBASIC11.94□□□□□ -0.5
Six4Q61321 Gm12501-201ENSMUST00000119163 529 ntBASIC11.94□□□□□ -0.5
Six4Q61321 Gm15207-201ENSMUST00000119259 442 ntBASIC11.94□□□□□ -0.5
Six4Q61321 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.94□□□□□ -0.5
Six4Q61321 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.94□□□□□ -0.5
Six4Q61321 Gm5733-201ENSMUST00000190232 939 ntBASIC11.94□□□□□ -0.5
Six4Q61321 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.94□□□□□ -0.5
Six4Q61321 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.94□□□□□ -0.5
Six4Q61321 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.94□□□□□ -0.5
Six4Q61321 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six4Q61321 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Six4Q61321 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Six4Q61321 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.93□□□□□ -0.5
Six4Q61321 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Six4Q61321 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Six4Q61321 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.93□□□□□ -0.5
Six4Q61321 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Six4Q61321 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Six4Q61321 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Six4Q61321 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Gm4909-201ENSMUST00000118749 794 ntBASIC11.93□□□□□ -0.5
Six4Q61321 Gm11700-201ENSMUST00000119409 403 ntBASIC11.93□□□□□ -0.5
Six4Q61321 Gm11450-201ENSMUST00000121144 333 ntBASIC11.93□□□□□ -0.5
Six4Q61321 Gm8199-201ENSMUST00000121323 823 ntBASIC11.93□□□□□ -0.5
Six4Q61321 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.93□□□□□ -0.5
Six4Q61321 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.93□□□□□ -0.5
Six4Q61321 Gm18734-201ENSMUST00000172937 808 ntBASIC11.93□□□□□ -0.5
Six4Q61321 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Six4Q61321 Gm8100-201ENSMUST00000182906 988 ntBASIC11.93□□□□□ -0.5
Six4Q61321 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.93□□□□□ -0.5
Six4Q61321 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six4Q61321 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.93□□□□□ -0.5
Six4Q61321 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms