Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm29400-201ENSMUST00000187208 695 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm28662-201ENSMUST00000188446 695 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm28251-201ENSMUST00000188835 695 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm37318-201ENSMUST00000194325 695 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm38017-201ENSMUST00000194768 695 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm37287-201ENSMUST00000195449 695 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm37793-201ENSMUST00000195548 695 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm42660-201ENSMUST00000197733 947 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm7928-201ENSMUST00000181249 701 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm45090-201ENSMUST00000208775 1148 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm4778-201ENSMUST00000098878 1098 ntBASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.39□□□□□ -0.59
Col12a1Q60847 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col12a1Q60847 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.38□□□□□ -0.59
Col12a1Q60847 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Col12a1Q60847 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Mir7088-201ENSMUST00000184227 86 ntBASIC11.38□□□□□ -0.59
Col12a1Q60847 BB187690-201ENSMUST00000198619 1176 ntBASIC11.38□□□□□ -0.59
Col12a1Q60847 CT025618.1-201ENSMUST00000227409 1279 ntBASIC11.38□□□□□ -0.59
Col12a1Q60847 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Col12a1Q60847 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Col12a1Q60847 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Col12a1Q60847 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Col12a1Q60847 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Gm22495-201ENSMUST00000104492 126 ntBASIC11.38□□□□□ -0.59
Col12a1Q60847 Gm15610-201ENSMUST00000120584 195 ntBASIC11.38□□□□□ -0.59
Col12a1Q60847 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.38□□□□□ -0.59
Col12a1Q60847 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Gm16210-201ENSMUST00000122161 610 ntBASIC11.38□□□□□ -0.59
Col12a1Q60847 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Gm6946-201ENSMUST00000182237 987 ntBASIC11.38□□□□□ -0.59
Col12a1Q60847 Gm27316-201ENSMUST00000184884 277 ntBASIC11.38□□□□□ -0.59
Col12a1Q60847 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Gm18555-201ENSMUST00000197935 584 ntBASIC11.38□□□□□ -0.59
Col12a1Q60847 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
Col12a1Q60847 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC11.38□□□□□ -0.59
Col12a1Q60847 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col12a1Q60847 Gm25580-201ENSMUST00000083409 327 ntBASIC11.38□□□□□ -0.59
Col12a1Q60847 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col12a1Q60847 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Col12a1Q60847 Gm15617-201ENSMUST00000118973 771 ntBASIC11.37□□□□□ -0.59
Col12a1Q60847 Gm11952-201ENSMUST00000121172 821 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms