Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf20Q5DTM8 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Rgr-203ENSMUST00000225070 4704 ntBASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Gm15004-201ENSMUST00000119192 630 ntBASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Gm9192-201ENSMUST00000183221 985 ntBASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Gm43371-201ENSMUST00000202838 1031 ntBASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Gm45224-201ENSMUST00000208203 414 ntBASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Gm5705-201ENSMUST00000066241 711 ntBASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rnf20Q5DTM8 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gm11700-201ENSMUST00000119409 403 ntBASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gm17376-201ENSMUST00000166016 84 ntBASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gm27627-201ENSMUST00000183644 150 ntBASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gm17812-201ENSMUST00000204935 318 ntBASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gm6082-201ENSMUST00000215204 454 ntBASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gm2553-201ENSMUST00000215986 605 ntBASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf20Q5DTM8 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf20Q5DTM8 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf20Q5DTM8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf20Q5DTM8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf20Q5DTM8 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf20Q5DTM8 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf20Q5DTM8 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf20Q5DTM8 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf20Q5DTM8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf20Q5DTM8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf20Q5DTM8 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms