Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snx27Q3UHD6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snx27Q3UHD6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.83□□□□□ -0.36
Snx27Q3UHD6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Snx27Q3UHD6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.83□□□□□ -0.36
Snx27Q3UHD6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Snx27Q3UHD6 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Snx27Q3UHD6 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.83□□□□□ -0.36
Snx27Q3UHD6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Gm11836-201ENSMUST00000121022 441 ntBASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Gm8737-201ENSMUST00000122208 642 ntBASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Gm44545-201ENSMUST00000208262 746 ntBASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Gm44551-201ENSMUST00000208804 171 ntBASIC12.82□□□□□ -0.36
Snx27Q3UHD6 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.82□□□□□ -0.36
Snx27Q3UHD6 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Snx27Q3UHD6 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Gm11246-201ENSMUST00000120880 345 ntBASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Gm21092-201ENSMUST00000178995 955 ntBASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Gm10731-201ENSMUST00000181171 448 ntBASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Gm45550-201ENSMUST00000209380 946 ntBASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Snx27Q3UHD6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.81□□□□□ -0.36
Snx27Q3UHD6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Snx27Q3UHD6 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms