Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Gm28882-201ENSMUST00000185504 314 ntBASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Gm43118-201ENSMUST00000199149 775 ntBASIC12.57□□□□□ -0.4
Trim43aQ3TL54 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.57□□□□□ -0.4
Trim43aQ3TL54 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43aQ3TL54 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Gm13875-201ENSMUST00000120162 282 ntBASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms