Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Gm18212-201ENSMUST00000211678 889 ntBASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Gm30285-201ENSMUST00000214614 422 ntBASIC11.53□□□□□ -0.56
Usp39Q3TIX9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Usp39Q3TIX9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usp39Q3TIX9 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.52□□□□□ -0.56
Usp39Q3TIX9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usp39Q3TIX9 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usp39Q3TIX9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Usp39Q3TIX9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Usp39Q3TIX9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Usp39Q3TIX9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm14017-201ENSMUST00000121934 386 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm25890-201ENSMUST00000177643 165 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm22614-201ENSMUST00000178300 165 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm5706-201ENSMUST00000181525 993 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm19208-201ENSMUST00000213861 912 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm9996-201ENSMUST00000070359 913 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm22042-201ENSMUST00000082989 165 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm26110-201ENSMUST00000083971 165 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Usp39Q3TIX9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Gm5950-201ENSMUST00000213337 772 ntBASIC11.51□□□□□ -0.57
Usp39Q3TIX9 Gm19994-201ENSMUST00000217086 586 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms