Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Gm15515-201ENSMUST00000117827 822 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Gm18038-201ENSMUST00000197900 485 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Gm17827-201ENSMUST00000211825 742 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Ntng1-201ENSMUST00000051253 327 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc4Q3TCX3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Gm14058-201ENSMUST00000116082 735 ntBASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Gm13408-201ENSMUST00000119822 798 ntBASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Gm13935-201ENSMUST00000121859 798 ntBASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Mir7032-201ENSMUST00000185154 79 ntBASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Gm7467-201ENSMUST00000185173 652 ntBASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Gm43962-201ENSMUST00000203898 190 ntBASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Gm19994-201ENSMUST00000217086 586 ntBASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms