Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gzmg-201ENSMUST00000015578 909 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm6129-201ENSMUST00000220725 801 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 AC068459.1-201ENSMUST00000222492 905 ntTSL 3 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 CT025547.1-201ENSMUST00000225127 578 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 AC158122.1-201ENSMUST00000227398 673 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Cib3-201ENSMUST00000098630 585 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm14740-201ENSMUST00000118538 1150 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm26047-201ENSMUST00000157308 113 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm26047-202ENSMUST00000198840 115 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 AC164429.1-201ENSMUST00000224210 518 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm12716-201ENSMUST00000120606 1354 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm36670-202ENSMUST00000210400 1405 ntTSL 5 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm3052-201ENSMUST00000186409 829 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Ighv5-10-201ENSMUST00000194591 252 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 AC154585.1-201ENSMUST00000218917 997 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 AC160109.1-201ENSMUST00000225592 729 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm25514-201ENSMUST00000083860 135 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm2492-201ENSMUST00000221355 1394 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm5764-201ENSMUST00000118817 885 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm15355-201ENSMUST00000118929 285 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm7158-201ENSMUST00000120079 903 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm7880-201ENSMUST00000203748 871 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 4933427I22Rik-202ENSMUST00000153921 1378 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm5944-201ENSMUST00000118182 1001 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm9516-201ENSMUST00000119684 424 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm16219-201ENSMUST00000120096 274 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms