Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Znf541Q0GGX2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Gm13326-201ENSMUST00000118730 1011 ntBASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Gm6485-201ENSMUST00000160676 439 ntBASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 AC154589.2-201ENSMUST00000228847 251 ntBASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Znf541Q0GGX2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC14.89□□□□□ -0.03
Znf541Q0GGX2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Gm24992-201ENSMUST00000157412 130 ntBASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Gm9353-201ENSMUST00000200472 604 ntBASIC14.89□□□□□ -0.03
Znf541Q0GGX2 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Znf541Q0GGX2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Gm24514-201ENSMUST00000174961 285 ntBASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms