Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 n-R5s107-201ENSMUST00000179704 119 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm26391-201ENSMUST00000179843 119 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 n-R5s110-201ENSMUST00000179995 119 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 n-R5s128-201ENSMUST00000180096 119 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 n-R5s124-201ENSMUST00000180334 119 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm29783-201ENSMUST00000219398 369 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm24089-201ENSMUST00000093696 109 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm15636-201ENSMUST00000119205 668 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm15570-201ENSMUST00000122093 625 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm5873-201ENSMUST00000177157 1066 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm25591-201ENSMUST00000177317 94 ntBASIC10.58□□□□□ -0.72
Chd8Q09XV5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd8Q09XV5 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.57□□□□□ -0.72
Chd8Q09XV5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm8643-201ENSMUST00000195228 625 ntBASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm43103-201ENSMUST00000199021 802 ntBASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm44958-201ENSMUST00000203734 736 ntBASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm44605-201ENSMUST00000206892 949 ntBASIC10.57□□□□□ -0.72
Chd8Q09XV5 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm13777-201ENSMUST00000118208 345 ntBASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm14156-201ENSMUST00000121538 483 ntBASIC10.57□□□□□ -0.72
Chd8Q09XV5 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm8459-201ENSMUST00000162504 760 ntBASIC10.57□□□□□ -0.72
Chd8Q09XV5 Gm4960-201ENSMUST00000182928 1001 ntBASIC10.57□□□□□ -0.72
Chd8Q09XV5 AC140314.1-201ENSMUST00000219549 554 ntBASIC10.57□□□□□ -0.72
Chd8Q09XV5 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Chd8Q09XV5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms