Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Gm37396-201ENSMUST00000191827 1495 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12□□□□□ -0.49
Col9a1Q05722 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col9a1Q05722 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm12757-201ENSMUST00000119465 800 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm15227-201ENSMUST00000121844 399 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm13874-202ENSMUST00000135348 941 ntTSL 3 BASIC11.99□□□□□ -0.49
Col9a1Q05722 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm17192-201ENSMUST00000169031 511 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm27956-201ENSMUST00000175604 260 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm37932-201ENSMUST00000192258 1167 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC11.99□□□□□ -0.49
Col9a1Q05722 AL645546.2-201ENSMUST00000224526 265 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm12586-201ENSMUST00000117328 1316 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.99□□□□□ -0.49
Col9a1Q05722 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col9a1Q05722 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col9a1Q05722 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm37370-201ENSMUST00000191996 1410 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms