Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
GabpaQ00422 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
GabpaQ00422 Gm25076-201ENSMUST00000104098 132 ntBASIC13.44□□□□□ -0.26
GabpaQ00422 Mir1901-201ENSMUST00000122616 78 ntBASIC13.44□□□□□ -0.26
GabpaQ00422 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.44□□□□□ -0.26
GabpaQ00422 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.44□□□□□ -0.26
GabpaQ00422 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.44□□□□□ -0.26
GabpaQ00422 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.44□□□□□ -0.26
GabpaQ00422 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Gm6485-201ENSMUST00000160676 439 ntBASIC13.44□□□□□ -0.26
GabpaQ00422 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.44□□□□□ -0.26
GabpaQ00422 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Gm42599-201ENSMUST00000201308 469 ntBASIC13.44□□□□□ -0.26
GabpaQ00422 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.44□□□□□ -0.26
GabpaQ00422 Gm7600-201ENSMUST00000209657 785 ntBASIC13.44□□□□□ -0.26
GabpaQ00422 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.44□□□□□ -0.26
GabpaQ00422 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.44□□□□□ -0.26
GabpaQ00422 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Olfr584-201ENSMUST00000098210 964 ntBASIC13.44□□□□□ -0.26
GabpaQ00422 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.44□□□□□ -0.26
GabpaQ00422 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.44□□□□□ -0.26
GabpaQ00422 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.44□□□□□ -0.26
GabpaQ00422 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
GabpaQ00422 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
GabpaQ00422 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
GabpaQ00422 Gm11451-201ENSMUST00000118946 630 ntBASIC13.43□□□□□ -0.26
GabpaQ00422 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Mir8093-201ENSMUST00000185043 137 ntBASIC13.43□□□□□ -0.26
GabpaQ00422 Gm5982-201ENSMUST00000196234 512 ntBASIC13.43□□□□□ -0.26
GabpaQ00422 Gm44329-201ENSMUST00000197469 112 ntBASIC13.43□□□□□ -0.26
GabpaQ00422 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.43□□□□□ -0.26
GabpaQ00422 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.43□□□□□ -0.26
GabpaQ00422 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
GabpaQ00422 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
GabpaQ00422 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
GabpaQ00422 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.43□□□□□ -0.26
GabpaQ00422 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
GabpaQ00422 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GabpaQ00422 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms