Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.25□□□□□ -0.61
Nkx3-2P97503 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm23596-201ENSMUST00000104304 132 ntBASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm13035-201ENSMUST00000117496 342 ntBASIC11.25□□□□□ -0.61
Nkx3-2P97503 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm23085-201ENSMUST00000157849 293 ntBASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm22902-201ENSMUST00000158488 302 ntBASIC11.25□□□□□ -0.61
Nkx3-2P97503 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Spcs1-203ENSMUST00000226374 592 ntBASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm26448-201ENSMUST00000082446 203 ntBASIC11.25□□□□□ -0.61
Nkx3-2P97503 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.25□□□□□ -0.61
Nkx3-2P97503 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.25□□□□□ -0.61
Nkx3-2P97503 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx3-2P97503 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.25□□□□□ -0.61
Nkx3-2P97503 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Gm15515-201ENSMUST00000117827 822 ntBASIC11.24□□□□□ -0.61
Nkx3-2P97503 Gm12196-201ENSMUST00000120954 262 ntBASIC11.24□□□□□ -0.61
Nkx3-2P97503 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Gm4607-201ENSMUST00000206649 577 ntBASIC11.24□□□□□ -0.61
Nkx3-2P97503 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.24□□□□□ -0.61
Nkx3-2P97503 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nkx3-2P97503 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms