Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim43bP86448 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43bP86448 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.22□□□□□ -0.45
Trim43bP86448 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 BC043934-202ENSMUST00000185694 2356 ntBASIC12.22□□□□□ -0.45
Trim43bP86448 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.22□□□□□ -0.45
Trim43bP86448 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim43bP86448 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim43bP86448 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim43bP86448 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim43bP86448 Gm12036-201ENSMUST00000120008 530 ntBASIC12.22□□□□□ -0.45
Trim43bP86448 Gm15547-201ENSMUST00000122152 333 ntBASIC12.22□□□□□ -0.45
Trim43bP86448 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim43bP86448 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.22□□□□□ -0.45
Trim43bP86448 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trim43bP86448 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.22□□□□□ -0.45
Trim43bP86448 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.22□□□□□ -0.45
Trim43bP86448 Gm37201-201ENSMUST00000191845 523 ntBASIC12.22□□□□□ -0.45
Trim43bP86448 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim43bP86448 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim43bP86448 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim43bP86448 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim43bP86448 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim43bP86448 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trim43bP86448 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim43bP86448 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim43bP86448 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim43bP86448 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim43bP86448 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trim43bP86448 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43bP86448 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.21□□□□□ -0.45
Trim43bP86448 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.21□□□□□ -0.45
Trim43bP86448 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim43bP86448 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Gm11531-201ENSMUST00000117614 555 ntBASIC12.21□□□□□ -0.45
Trim43bP86448 Gm13736-201ENSMUST00000119272 253 ntBASIC12.21□□□□□ -0.45
Trim43bP86448 Gm9083-201ENSMUST00000120423 819 ntBASIC12.21□□□□□ -0.45
Trim43bP86448 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.21□□□□□ -0.45
Trim43bP86448 Gm11597-201ENSMUST00000121423 964 ntBASIC12.21□□□□□ -0.45
Trim43bP86448 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.21□□□□□ -0.45
Trim43bP86448 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim43bP86448 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim43bP86448 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim43bP86448 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim43bP86448 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.21□□□□□ -0.45
Trim43bP86448 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim43bP86448 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim43bP86448 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.21□□□□□ -0.45
Trim43bP86448 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43bP86448 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Trim43bP86448 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms