Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SgcbP82349 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
SgcbP82349 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Gm12380-201ENSMUST00000119012 544 ntBASIC10.63□□□□□ -0.71
SgcbP82349 Gm11660-201ENSMUST00000120955 412 ntBASIC10.63□□□□□ -0.71
SgcbP82349 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.63□□□□□ -0.71
SgcbP82349 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SgcbP82349 Gm17040-202ENSMUST00000170597 889 ntBASIC10.63□□□□□ -0.71
SgcbP82349 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SgcbP82349 Gm37666-201ENSMUST00000194110 866 ntBASIC10.63□□□□□ -0.71
SgcbP82349 Gm7003-201ENSMUST00000195089 312 ntBASIC10.63□□□□□ -0.71
SgcbP82349 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.63□□□□□ -0.71
SgcbP82349 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.63□□□□□ -0.71
SgcbP82349 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.63□□□□□ -0.71
SgcbP82349 Gm807-202ENSMUST00000224929 408 ntBASIC10.63□□□□□ -0.71
SgcbP82349 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
SgcbP82349 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
SgcbP82349 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SgcbP82349 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.63□□□□□ -0.71
SgcbP82349 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.63□□□□□ -0.71
SgcbP82349 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.63□□□□□ -0.71
SgcbP82349 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SgcbP82349 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.63□□□□□ -0.71
SgcbP82349 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.63□□□□□ -0.71
SgcbP82349 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.62□□□□□ -0.71
SgcbP82349 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.62□□□□□ -0.71
SgcbP82349 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
SgcbP82349 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.62□□□□□ -0.71
SgcbP82349 Gm12217-201ENSMUST00000118858 696 ntBASIC10.62□□□□□ -0.71
SgcbP82349 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
SgcbP82349 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Gm18893-201ENSMUST00000198416 943 ntBASIC10.62□□□□□ -0.71
SgcbP82349 Gm17931-201ENSMUST00000208132 634 ntBASIC10.62□□□□□ -0.71
SgcbP82349 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Gm270-201ENSMUST00000223010 976 ntBASIC10.62□□□□□ -0.71
SgcbP82349 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
SgcbP82349 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
SgcbP82349 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SgcbP82349 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.61□□□□□ -0.71
SgcbP82349 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.61□□□□□ -0.71
SgcbP82349 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.61□□□□□ -0.71
SgcbP82349 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms