Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.84□□□□□ -0.35
CiitaP79621 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CiitaP79621 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.84□□□□□ -0.35
CiitaP79621 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.84□□□□□ -0.35
CiitaP79621 Gm15881-201ENSMUST00000148792 942 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.84□□□□□ -0.35
CiitaP79621 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Gm8459-201ENSMUST00000162504 760 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.84□□□□□ -0.35
CiitaP79621 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Gm10807-201ENSMUST00000177134 795 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Mir8093-201ENSMUST00000185043 137 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Gm43916-201ENSMUST00000205062 967 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Gm17831-201ENSMUST00000205579 900 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.84□□□□□ -0.35
CiitaP79621 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.84□□□□□ -0.35
CiitaP79621 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.84□□□□□ -0.35
CiitaP79621 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.84□□□□□ -0.35
CiitaP79621 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CiitaP79621 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CiitaP79621 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.84□□□□□ -0.35
CiitaP79621 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CiitaP79621 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CiitaP79621 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
CiitaP79621 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CiitaP79621 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CiitaP79621 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CiitaP79621 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
CiitaP79621 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CiitaP79621 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CiitaP79621 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CiitaP79621 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CiitaP79621 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CiitaP79621 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.83□□□□□ -0.36
CiitaP79621 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CiitaP79621 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CiitaP79621 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.83□□□□□ -0.36
CiitaP79621 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.83□□□□□ -0.36
CiitaP79621 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.83□□□□□ -0.36
CiitaP79621 Gm11956-201ENSMUST00000119525 512 ntBASIC12.83□□□□□ -0.36
CiitaP79621 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.83□□□□□ -0.36
CiitaP79621 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Gm17391-201ENSMUST00000171036 126 ntBASIC12.83□□□□□ -0.36
CiitaP79621 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CiitaP79621 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.83□□□□□ -0.36
CiitaP79621 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.83□□□□□ -0.36
CiitaP79621 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.83□□□□□ -0.36
CiitaP79621 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CiitaP79621 Gm6108-201ENSMUST00000208365 367 ntBASIC12.83□□□□□ -0.36
CiitaP79621 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.83□□□□□ -0.36
CiitaP79621 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CiitaP79621 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.83□□□□□ -0.36
CiitaP79621 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms