Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC9.8□□□□□ -0.84
Usp9xP70398 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC9.8□□□□□ -0.84
Usp9xP70398 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC9.8□□□□□ -0.84
Usp9xP70398 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Gm2553-201ENSMUST00000215986 605 ntBASIC9.8□□□□□ -0.84
Usp9xP70398 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC9.8□□□□□ -0.84
Usp9xP70398 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC9.8□□□□□ -0.84
Usp9xP70398 Gm8181-201ENSMUST00000062242 669 ntBASIC9.8□□□□□ -0.84
Usp9xP70398 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Usp9xP70398 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usp9xP70398 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Usp9xP70398 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Usp9xP70398 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC9.79□□□□□ -0.84
Usp9xP70398 Gm13094-201ENSMUST00000117930 409 ntBASIC9.79□□□□□ -0.84
Usp9xP70398 Gm13039-201ENSMUST00000118638 794 ntBASIC9.79□□□□□ -0.84
Usp9xP70398 Gm12345-201ENSMUST00000119288 898 ntBASIC9.79□□□□□ -0.84
Usp9xP70398 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.79□□□□□ -0.84
Usp9xP70398 Gm44216-201ENSMUST00000203942 157 ntBASIC9.79□□□□□ -0.84
Usp9xP70398 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.79□□□□□ -0.84
Usp9xP70398 AC169511.1-201ENSMUST00000227639 995 ntBASIC9.79□□□□□ -0.84
Usp9xP70398 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Usp9xP70398 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Usp9xP70398 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Usp9xP70398 Gm12470-201ENSMUST00000117239 1049 ntBASIC9.79□□□□□ -0.84
Usp9xP70398 Gm12986-201ENSMUST00000119037 967 ntBASIC9.79□□□□□ -0.84
Usp9xP70398 Gm11783-201ENSMUST00000119549 885 ntBASIC9.79□□□□□ -0.84
Usp9xP70398 Gm13624-201ENSMUST00000120263 462 ntBASIC9.79□□□□□ -0.84
Usp9xP70398 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.79□□□□□ -0.84
Usp9xP70398 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC9.79□□□□□ -0.84
Usp9xP70398 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Usp9xP70398 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Usp9xP70398 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Usp9xP70398 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.79□□□□□ -0.84
Usp9xP70398 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Usp9xP70398 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp9xP70398 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC9.78□□□□□ -0.84
Usp9xP70398 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.78□□□□□ -0.84
Usp9xP70398 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Usp9xP70398 Gm23595-201ENSMUST00000104306 130 ntBASIC9.78□□□□□ -0.84
Usp9xP70398 Gm25562-201ENSMUST00000104608 133 ntBASIC9.78□□□□□ -0.84
Usp9xP70398 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Usp9xP70398 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp9xP70398 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC9.78□□□□□ -0.84
Usp9xP70398 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp9xP70398 Gm7069-201ENSMUST00000182418 1008 ntBASIC9.78□□□□□ -0.84
Usp9xP70398 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC9.78□□□□□ -0.84
Usp9xP70398 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC9.78□□□□□ -0.84
Usp9xP70398 AC121357.1-201ENSMUST00000227365 608 ntBASIC9.78□□□□□ -0.84
Usp9xP70398 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp9xP70398 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp9xP70398 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Usp9xP70398 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Usp9xP70398 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp9xP70398 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp9xP70398 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp9xP70398 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp9xP70398 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Usp9xP70398 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms