Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smad1P70340 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smad1P70340 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Smad1P70340 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Gm12616-201ENSMUST00000118594 382 ntBASIC12.25□□□□□ -0.45
Smad1P70340 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.25□□□□□ -0.45
Smad1P70340 Gm25043-201ENSMUST00000158604 212 ntBASIC12.25□□□□□ -0.45
Smad1P70340 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smad1P70340 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smad1P70340 Gm12624-201ENSMUST00000177615 382 ntBASIC12.25□□□□□ -0.45
Smad1P70340 Gm12621-201ENSMUST00000177760 382 ntBASIC12.25□□□□□ -0.45
Smad1P70340 Gm12615-201ENSMUST00000177970 382 ntBASIC12.25□□□□□ -0.45
Smad1P70340 Gm12622-201ENSMUST00000177975 382 ntBASIC12.25□□□□□ -0.45
Smad1P70340 Gm12627-201ENSMUST00000178412 382 ntBASIC12.25□□□□□ -0.45
Smad1P70340 Gm12625-201ENSMUST00000179122 382 ntBASIC12.25□□□□□ -0.45
Smad1P70340 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Smad1P70340 Gm12614-201ENSMUST00000179586 382 ntBASIC12.25□□□□□ -0.45
Smad1P70340 Gm12613-201ENSMUST00000180323 382 ntBASIC12.25□□□□□ -0.45
Smad1P70340 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.25□□□□□ -0.45
Smad1P70340 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.25□□□□□ -0.45
Smad1P70340 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Smad1P70340 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smad1P70340 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Smad1P70340 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Smad1P70340 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.25□□□□□ -0.45
Smad1P70340 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.25□□□□□ -0.45
Smad1P70340 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smad1P70340 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.24□□□□□ -0.45
Smad1P70340 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.24□□□□□ -0.45
Smad1P70340 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smad1P70340 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smad1P70340 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smad1P70340 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.24□□□□□ -0.45
Smad1P70340 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.24□□□□□ -0.45
Smad1P70340 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smad1P70340 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smad1P70340 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.24□□□□□ -0.45
Smad1P70340 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smad1P70340 Gm37835-201ENSMUST00000193305 361 ntBASIC12.24□□□□□ -0.45
Smad1P70340 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.24□□□□□ -0.45
Smad1P70340 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.24□□□□□ -0.45
Smad1P70340 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.24□□□□□ -0.45
Smad1P70340 AU022133-201ENSMUST00000200601 873 ntBASIC12.24□□□□□ -0.45
Smad1P70340 Gm44262-201ENSMUST00000204969 372 ntBASIC12.24□□□□□ -0.45
Smad1P70340 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smad1P70340 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.24□□□□□ -0.45
Smad1P70340 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.24□□□□□ -0.45
Smad1P70340 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.24□□□□□ -0.45
Smad1P70340 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.24□□□□□ -0.45
Smad1P70340 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.24□□□□□ -0.45
Smad1P70340 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.24□□□□□ -0.45
Smad1P70340 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smad1P70340 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smad1P70340 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.23□□□□□ -0.45
Smad1P70340 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.23□□□□□ -0.45
Smad1P70340 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smad1P70340 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smad1P70340 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms