Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.91□□□□□ -0.82
Pdlim4P70271 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.91□□□□□ -0.82
Pdlim4P70271 Gm4857-201ENSMUST00000192718 785 ntBASIC9.91□□□□□ -0.82
Pdlim4P70271 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.9□□□□□ -0.82
Pdlim4P70271 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Pdlim4P70271 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Pdlim4P70271 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Gm7722-201ENSMUST00000120646 741 ntBASIC9.9□□□□□ -0.82
Pdlim4P70271 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.9□□□□□ -0.82
Pdlim4P70271 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.9□□□□□ -0.82
Pdlim4P70271 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.9□□□□□ -0.82
Pdlim4P70271 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Gm45224-201ENSMUST00000208203 414 ntBASIC9.9□□□□□ -0.82
Pdlim4P70271 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.9□□□□□ -0.82
Pdlim4P70271 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.9□□□□□ -0.82
Pdlim4P70271 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.9□□□□□ -0.82
Pdlim4P70271 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.9□□□□□ -0.82
Pdlim4P70271 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pdlim4P70271 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Pdlim4P70271 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Pdlim4P70271 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Pdlim4P70271 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Pdlim4P70271 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Pdlim4P70271 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Pdlim4P70271 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Pdlim4P70271 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Pdlim4P70271 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.89□□□□□ -0.83
Pdlim4P70271 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.89□□□□□ -0.83
Pdlim4P70271 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.89□□□□□ -0.83
Pdlim4P70271 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Pdlim4P70271 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.89□□□□□ -0.83
Pdlim4P70271 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Gm27627-201ENSMUST00000183644 150 ntBASIC9.89□□□□□ -0.83
Pdlim4P70271 Gm27390-201ENSMUST00000184516 176 ntBASIC9.89□□□□□ -0.83
Pdlim4P70271 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pdlim4P70271 Gm38241-201ENSMUST00000192641 898 ntBASIC9.89□□□□□ -0.83
Pdlim4P70271 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.89□□□□□ -0.83
Pdlim4P70271 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Pdlim4P70271 Gm42599-201ENSMUST00000201308 469 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms