Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ybx1P62960 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ybx1P62960 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.16□□□□□ -0.46
Ybx1P62960 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.16□□□□□ -0.46
Ybx1P62960 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.16□□□□□ -0.46
Ybx1P62960 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.16□□□□□ -0.46
Ybx1P62960 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Gm9630-201ENSMUST00000178304 885 ntBASIC12.16□□□□□ -0.46
Ybx1P62960 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.16□□□□□ -0.46
Ybx1P62960 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.16□□□□□ -0.46
Ybx1P62960 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ybx1P62960 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Gm3793-201ENSMUST00000204973 672 ntBASIC12.16□□□□□ -0.46
Ybx1P62960 Gm2875-201ENSMUST00000211333 360 ntBASIC12.16□□□□□ -0.46
Ybx1P62960 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.16□□□□□ -0.46
Ybx1P62960 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.16□□□□□ -0.46
Ybx1P62960 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.16□□□□□ -0.46
Ybx1P62960 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ybx1P62960 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ybx1P62960 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ybx1P62960 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.16□□□□□ -0.46
Ybx1P62960 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ybx1P62960 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ybx1P62960 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.15□□□□□ -0.46
Ybx1P62960 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.15□□□□□ -0.46
Ybx1P62960 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.15□□□□□ -0.46
Ybx1P62960 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.15□□□□□ -0.46
Ybx1P62960 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.15□□□□□ -0.46
Ybx1P62960 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Gm6407-201ENSMUST00000176468 549 ntBASIC12.15□□□□□ -0.46
Ybx1P62960 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ybx1P62960 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.15□□□□□ -0.46
Ybx1P62960 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.15□□□□□ -0.46
Ybx1P62960 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.15□□□□□ -0.46
Ybx1P62960 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.15□□□□□ -0.46
Ybx1P62960 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.15□□□□□ -0.46
Ybx1P62960 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Ybx1P62960 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.15□□□□□ -0.46
Ybx1P62960 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ybx1P62960 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ybx1P62960 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.15□□□□□ -0.46
Ybx1P62960 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Ybx1P62960 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.15□□□□□ -0.47
Ybx1P62960 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ybx1P62960 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ybx1P62960 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Ybx1P62960 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ybx1P62960 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.14□□□□□ -0.47
Ybx1P62960 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.14□□□□□ -0.47
Ybx1P62960 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms