Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm6P62313 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.44□□□□□ -0.74
Lsm6P62313 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.43□□□□□ -0.74
Lsm6P62313 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Lsm6P62313 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.43□□□□□ -0.74
Lsm6P62313 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Lsm6P62313 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Lsm6P62313 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.43□□□□□ -0.74
Lsm6P62313 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.43□□□□□ -0.74
Lsm6P62313 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Lsm6P62313 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.43□□□□□ -0.74
Lsm6P62313 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.43□□□□□ -0.74
Lsm6P62313 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.43□□□□□ -0.74
Lsm6P62313 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Gm9192-201ENSMUST00000183221 985 ntBASIC10.43□□□□□ -0.74
Lsm6P62313 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.43□□□□□ -0.74
Lsm6P62313 Gm45331-201ENSMUST00000209868 554 ntBASIC10.43□□□□□ -0.74
Lsm6P62313 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.43□□□□□ -0.74
Lsm6P62313 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Lsm6P62313 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.43□□□□□ -0.74
Lsm6P62313 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm6P62313 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.43□□□□□ -0.74
Lsm6P62313 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.43□□□□□ -0.74
Lsm6P62313 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Lsm6P62313 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Lsm6P62313 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.43□□□□□ -0.74
Lsm6P62313 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Lsm6P62313 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Lsm6P62313 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
Lsm6P62313 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Lsm6P62313 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.42□□□□□ -0.74
Lsm6P62313 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Gm22133-201ENSMUST00000102082 109 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.42□□□□□ -0.74
Lsm6P62313 Gm25668-201ENSMUST00000157700 129 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Lsm6P62313 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Gm37259-201ENSMUST00000193903 849 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 Gm2553-201ENSMUST00000215986 605 ntBASIC10.42□□□□□ -0.74
Lsm6P62313 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Lsm6P62313 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.42□□□□□ -0.74
Lsm6P62313 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Lsm6P62313 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm6P62313 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Lsm6P62313 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Lsm6P62313 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms