Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Lsm3P62311 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Lsm3P62311 Gm11964-201ENSMUST00000120982 444 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 Gm11594-201ENSMUST00000122313 162 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.74□□□□□ -0.69
Lsm3P62311 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Lsm3P62311 Gm38092-201ENSMUST00000195600 653 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 Gm43002-201ENSMUST00000200310 155 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 Gm18473-201ENSMUST00000220543 868 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Gm24526-201ENSMUST00000082921 158 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.74□□□□□ -0.69
Lsm3P62311 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Lsm3P62311 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.74□□□□□ -0.69
Lsm3P62311 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Lsm3P62311 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.74□□□□□ -0.69
Lsm3P62311 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm3P62311 Spata33-207ENSMUST00000212760 4074 ntBASIC10.74□□□□□ -0.69
Lsm3P62311 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Lsm3P62311 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Lsm3P62311 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Lsm3P62311 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Lsm3P62311 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Lsm3P62311 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Lsm3P62311 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.73□□□□□ -0.69
Lsm3P62311 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.73□□□□□ -0.69
Lsm3P62311 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.73□□□□□ -0.69
Lsm3P62311 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.73□□□□□ -0.69
Lsm3P62311 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Lsm3P62311 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Lsm3P62311 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.73□□□□□ -0.69
Lsm3P62311 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Lsm3P62311 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.73□□□□□ -0.69
Lsm3P62311 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.73□□□□□ -0.69
Lsm3P62311 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm3P62311 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm3P62311 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Lsm3P62311 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm3P62311 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.72□□□□□ -0.69
Lsm3P62311 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Lsm3P62311 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms