Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.48□□□□□ -0.73
Sec61a1P61620 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Gm24255-201ENSMUST00000104481 128 ntBASIC10.47□□□□□ -0.73
Sec61a1P61620 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Gm38241-201ENSMUST00000192641 898 ntBASIC10.47□□□□□ -0.73
Sec61a1P61620 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.47□□□□□ -0.73
Sec61a1P61620 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sec61a1P61620 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sec61a1P61620 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.46□□□□□ -0.73
Sec61a1P61620 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Sec61a1P61620 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.46□□□□□ -0.73
Sec61a1P61620 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.46□□□□□ -0.73
Sec61a1P61620 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Sec61a1P61620 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Sec61a1P61620 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Sec61a1P61620 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Sec61a1P61620 Gm11964-201ENSMUST00000120982 444 ntBASIC10.46□□□□□ -0.73
Sec61a1P61620 Gm14381-201ENSMUST00000122105 414 ntBASIC10.46□□□□□ -0.73
Sec61a1P61620 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.46□□□□□ -0.73
Sec61a1P61620 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.46□□□□□ -0.73
Sec61a1P61620 Gm17376-201ENSMUST00000166016 84 ntBASIC10.46□□□□□ -0.73
Sec61a1P61620 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.46□□□□□ -0.73
Sec61a1P61620 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.46□□□□□ -0.73
Sec61a1P61620 Gm2546-201ENSMUST00000182630 991 ntBASIC10.46□□□□□ -0.73
Sec61a1P61620 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.46□□□□□ -0.73
Sec61a1P61620 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.46□□□□□ -0.73
Sec61a1P61620 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.46□□□□□ -0.73
Sec61a1P61620 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.46□□□□□ -0.73
Sec61a1P61620 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Sec61a1P61620 Gm30285-201ENSMUST00000214614 422 ntBASIC10.46□□□□□ -0.73
Sec61a1P61620 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.46□□□□□ -0.73
Sec61a1P61620 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.46□□□□□ -0.73
Sec61a1P61620 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sec61a1P61620 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.46□□□□□ -0.74
Sec61a1P61620 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms