Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.36□□□□□ -0.27
Rrp1P56183 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.36□□□□□ -0.27
Rrp1P56183 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.36□□□□□ -0.27
Rrp1P56183 Mospd4-201ENSMUST00000180618 576 ntBASIC13.36□□□□□ -0.27
Rrp1P56183 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.36□□□□□ -0.27
Rrp1P56183 Gm38002-201ENSMUST00000193255 180 ntBASIC13.36□□□□□ -0.27
Rrp1P56183 Gm43133-201ENSMUST00000197472 463 ntBASIC13.36□□□□□ -0.27
Rrp1P56183 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.36□□□□□ -0.27
Rrp1P56183 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.36□□□□□ -0.27
Rrp1P56183 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rrp1P56183 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.36□□□□□ -0.27
Rrp1P56183 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.36□□□□□ -0.27
Rrp1P56183 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Gm9823-201ENSMUST00000051212 327 ntBASIC13.36□□□□□ -0.27
Rrp1P56183 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rrp1P56183 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Rrp1P56183 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rrp1P56183 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.35□□□□□ -0.27
Rrp1P56183 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 BC043934-202ENSMUST00000185694 2356 ntBASIC13.35□□□□□ -0.27
Rrp1P56183 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rrp1P56183 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rrp1P56183 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.35□□□□□ -0.27
Rrp1P56183 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.35□□□□□ -0.27
Rrp1P56183 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rrp1P56183 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.35□□□□□ -0.27
Rrp1P56183 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Rrp1P56183 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rrp1P56183 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.35□□□□□ -0.27
Rrp1P56183 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.35□□□□□ -0.27
Rrp1P56183 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.35□□□□□ -0.27
Rrp1P56183 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Gm7399-201ENSMUST00000032395 858 ntBASIC13.35□□□□□ -0.27
Rrp1P56183 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.35□□□□□ -0.27
Rrp1P56183 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rrp1P56183 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Rrp1P56183 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.35□□□□□ -0.27
Rrp1P56183 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rrp1P56183 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rrp1P56183 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp1P56183 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.34□□□□□ -0.27
Rrp1P56183 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.34□□□□□ -0.27
Rrp1P56183 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.34□□□□□ -0.27
Rrp1P56183 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.34□□□□□ -0.27
Rrp1P56183 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.34□□□□□ -0.27
Rrp1P56183 Gm45331-201ENSMUST00000209868 554 ntBASIC13.34□□□□□ -0.27
Rrp1P56183 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rrp1P56183 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.34□□□□□ -0.27
Rrp1P56183 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rrp1P56183 Olfr582-201ENSMUST00000098212 960 ntBASIC13.34□□□□□ -0.27
Rrp1P56183 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.34□□□□□ -0.27
Rrp1P56183 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rrp1P56183 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rrp1P56183 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.34□□□□□ -0.27
Rrp1P56183 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.34□□□□□ -0.27
Rrp1P56183 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rrp1P56183 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms