Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn2bP55271 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.33□□□□□ -0.6
Cdkn2bP55271 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.32□□□□□ -0.6
Cdkn2bP55271 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Gm12015-201ENSMUST00000117065 843 ntBASIC11.32□□□□□ -0.6
Cdkn2bP55271 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Gm38002-201ENSMUST00000193255 180 ntBASIC11.32□□□□□ -0.6
Cdkn2bP55271 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Gm8712-201ENSMUST00000221090 701 ntBASIC11.32□□□□□ -0.6
Cdkn2bP55271 Gm7046-201ENSMUST00000221351 977 ntBASIC11.32□□□□□ -0.6
Cdkn2bP55271 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn2bP55271 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Gm13786-201ENSMUST00000122371 333 ntBASIC11.31□□□□□ -0.6
Cdkn2bP55271 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Gm19309-201ENSMUST00000218295 205 ntBASIC11.31□□□□□ -0.6
Cdkn2bP55271 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.31□□□□□ -0.6
Cdkn2bP55271 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.31□□□□□ -0.6
Cdkn2bP55271 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.31□□□□□ -0.6
Cdkn2bP55271 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.31□□□□□ -0.6
Cdkn2bP55271 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn2bP55271 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn2bP55271 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms